Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866382:139866414:[+] chr12:51851282:51851326:[+] nonBSJ supported CDS

circRNA 5':AGCCAUGUCU-UCCAUCAAAUUAAUG----------UCUU-CCAG 3'


            ||||||| |||||||||| |||| |||


target  3':AUGGUACAAAUAGGUAGUUUACUCCUAGUCUGACGAAGAACGGUU 5'

 -25.30 4 RIC-seq
chrX:139866382:139866415:[+] chr12:51851280:51851326:[+] nonBSJ supported CDS

circRNA 5':AGCCAUGUCU-UCCAUCAAAUUAAUG----------UCUU-CCAGC 3'


            ||||||| |||||||||| |||| |||:|


target  3':AUGGUACAAAUAGGUAGUUUACUCCUAGUCUGACGAAGAACGGUUGG 5'

 -27.90 19 RIC-seq