Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866683:139866698:[+] chr12:88909378:88909397:[-] nonBSJ supported CDS

circRNA 5':AGCAU---CUCUGU-GUCUU 3'


            |||: ||||| :|||


target  3':CUGUGACUGAGACCUUAGAU 5'

 -10.80 3 RIC-seq
chrX:139866683:139866704:[+] chr12:88909314:88909344:[-] nonBSJ supported CDS

circRNA 5':AGCAUCU-CUG-UGUC-UUCC------AGCA 3'


            || || ||| |||| |||| |||


target  3':AUGACGAUGACGACAGUAAGGAUUCCCUCGA 5'

 -14.80 72 RIC-seq