Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865709:139865725:[+] chr2:136380243:136380262:[+] nonBSJ supported CDS

circRNA 5':AGUCUU--CCAGUA-AAUCU 3'


            |||| ||||| ||||


target  3':CUAGAUACGGUCAACUUAGU 5'

 -10.60 2 RIC-seq
chrX:139865970:139865990:[+] chr2:136396645:136396663:[+] nonBSJ supported CDS

circRNA 5':AUGUCUUCCAGAAAAUCCAUG 3'


            || ||||||||| ||:


target  3':GAC-GAAGGUCUUGAUAGUG 5'

 -15.60 1 RIC-seq
chrX:139865970:139865995:[+] chr2:136396639:136396663:[+] nonBSJ supported CDS

circRNA 5':AUGUCUUCCAGAAAAUCCAUGUCUUC 3'


            || ||||||||| ||: ||||


target  3':GAC-GAAGGUCUUGAUAGUGGAGAAC 5'

 -21.60 20 RIC-seq
chrX:139866647:139866663:[+] chr2:136396313:136396327:[+] nonBSJ supported CDS

circRNA 5':AGCAUCUGCUCGUCUUC 3'


            ||||| ||||||||


target  3':CCGUAG--GAGCAGAAC 5'

 -17.70 1 RIC-seq
chrX:139866648:139866663:[+] chr2:136396313:136396327:[+] nonBSJ supported CDS

circRNA 5': GCAUCUGCUCGUCUUC 3'


            ||||| ||||||||


target  3':CCGUAG--GAGCAGAAC 5'

 -17.50 1 RIC-seq