Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866481:139866504:[+] chr6:15524833:15524855:[-] nonBSJ supported CDS

circRNA 5':UUCCAACAAAGGUACGUCU--UCCAG 3'


            |||| |||| |:||| ||||


target  3':CAGGUAG--UCCAGGUAGACGAGGU 5'

 -18.30 1 RIC-seq
chrX:139866481:139866505:[+] chr6:15524833:15524856:[-] nonBSJ supported CDS

circRNA 5':UUCCAACAAAGGUACGUCU--UCCAGA 3'


            |||| |||| |:||| |||||


target  3':CAGGUAG--UCCAGGUAGACGAGGUC 5'

 -21.20 1 RIC-seq
chrX:139866481:139866505:[+] chr6:15524833:15524857:[-] nonBSJ supported CDS

circRNA 5':UUCCAACAAAGGUACGUCU--UCCAGA 3'


            |||| |||| |:||| |||||


target  3':CAGGUAG--UCCAGGUAGACGAGGUCG 5'

 -21.40 38 RIC-seq