Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865488:139865516:[+] chr5:133896436:133896459:[+] nonBSJ supported CDS

circRNA 5':CCAUGUCUUCCAAGAAGCUCCAAGUCUUC 3'


            || || ||| |||||| |:||:


target  3':AGUCGAGCAGG----UCGAGGC-CGGAGA 5'

 -20.10 11 RIC-seq
chrX:139865488:139865516:[+] chr5:133896437:133896459:[+] nonBSJ supported CDS

circRNA 5':CCAUGUCUUCCAAGAAGCUCCAAGUCUUC 3'


            || || ||| |||||| |:||:


target  3':AGUCGAGCAGG----UCGAGGC-CGGAG 5'

 -19.50 1 RIC-seq