Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865692:139865737:[+] chr8:74463311:74463340:[-] nonBSJ supported 3UTR

circRNA 5':GUCUUCCAC-CAAAUCCAAGUCUUCCAGUAAAUCUAGUUCUUCCAGA 3'


            ||| ||| || ||:||| ||||||| |||||


target  3': AGAU-GUGUGU--------------UCGUUU-GAUCAAGUAGGUCA 5'

 -24.50 1 RIC-seq
chrX:139865697:139865737:[+] chr8:74463314:74463340:[-] nonBSJ supported 3UTR

circRNA 5':CCAC-CAAAUCCAAGUCUUCCAGUAAAUCUAGUUCUUCCAGA 3'


            ||| || ||:||| ||||||| |||||


target  3':UGUGUGU--------------UCGUUU-GAUCAAGUAGGUCA 5'

 -23.50 1 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr8:74463311:74463340:[-] target - chr8:74463339-74463340 G>C RECA-EU ICGC
chr8:74463314:74463340:[-] target - chr8:74463339-74463340 G>C RECA-EU ICGC