5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865364:139865405:[+] | chr5:82836555:82836590:[+] | nonBSJ supported | CDS |
circRNA 5':GGUCUUCCAACAACUCCGGGUCUUCCAGCGACUUCAA-GUCUU 3' |||||| ||| |:||| || |||| :||| target 3':ACAGAAGUAUGU----GUCCAAAUCAUA-CU--AGUUAUAGAU 5' |
-16.90 | 14 | RIC-seq |
| chrX:139865392:139865407:[+] | chr5:82815907:82815922:[+] | nonBSJ supported | CDS |
circRNA 5':CGACUUCAAGUCUUCC 3' ||||:||||||||| target 3':ACUGAGGUUCAGAAGA 5' |
-23.00 | 2 | RIC-seq |
| chrX:139865499:139865516:[+] | chr5:82815907:82815927:[+] | nonBSJ supported | CDS |
circRNA 5':AAGAA--GCUCCAAGUCUUC 3' ||| :|||||||||||| target 3':CUCUGACUGAGGUUCAGAAGA 5' |
-22.50 | 1 | RIC-seq |
| chrX:139866163:139866178:[+] | chr5:82836469:82836484:[+] | nonBSJ supported | CDS |
circRNA 5':AAAAUCCUUGUCUUCC 3' |||||||||||:|| target 3':AUUUAGGAACAGGAGA 5' |
-20.80 | 1 | RIC-seq |
| chrX:139866289:139866304:[+] | chr5:82836469:82836484:[+] | nonBSJ supported | CDS |
circRNA 5':AAAAUCCUUGUCUUCC 3' |||||||||||:|| target 3':AUUUAGGAACAGGAGA 5' |
-20.80 | 1 | RIC-seq |
| chrX:139866289:139866338:[+] | chr5:82836456:82836484:[+] | nonBSJ supported | CDS |
circRNA 5':AAAAUCCUUGUCUUCCCUCAAAUCCAUAGCUUCCGAAAAAUCCAGGUCUU 3' |||||||||||:|| ||||||||| target 3':AUUUAGGAACAGGAGAAAC---------------------AGGUCCAGAU 5' |
-32.30 | 31 | RIC-seq |
| chrX:139866330:139866370:[+] | chr5:82832911:82832952:[+] | nonBSJ supported | CDS |
circRNA 5':CCAGGUCUUCCAGG-AAAUCCGUGUCUUCCAGCAAAUC---CACG 3' |||| |||| ||| || ||| ||| ||| target 3':AGUCCCUUAAGUCCAUUUUAA---AGUCGGUAAUCUAGUACGUGA 5' |
-16.90 | 27 | RIC-seq |
| chrX:139866566:139866605:[+] | chr5:82815767:82815804:[+] | nonBSJ supported | CDS |
circRNA 5':AUGUCUUCCAACUAAGCUACGUCUUCCAACA--AAUCCAUGU 3' ||||||| || | |||:|||| |||||||: target 3':GACAGAAGUAGUAG--GA-GAAGAGGGUUCCACUUAGGUAU 5' |
-25.70 | 8 | RIC-seq |
| chrX:139866567:139866605:[+] | chr5:82815767:82815804:[+] | nonBSJ supported | CDS |
circRNA 5': UGUCUUCCAACUAAGCUACGUCUUCCAACA--AAUCCAUGU 3' ||||||| || | |||:|||| |||||||: target 3':GACAGAAGUAGUAG--GA-GAAGAGGGUUCCACUUAGGUAU 5' |
-25.70 | 1 | RIC-seq |
| chrX:139866602:139866648:[+] | chr5:82815768:82815804:[+] | nonBSJ supported | CDS |
circRNA 5':AUGUCUUCCUAUAUC-UCCAGGUCUUCCAGCAUCUCCAGGGCU--UCCAG 3' ||||||| ||| ||| ||||| || |||:|| |||| target 3':GACAGAAG----UAGUAGG---AGAAG-----AG-GGUUCCACUUAGGUA 5' |
-29.40 | 10 | RIC-seq |
| chrX:139866727:139866765:[+] | chr5:82834443:82834479:[+] | nonBSJ supported | CDS |
circRNA 5':CCCAGUCUUCCAUCAACUGGCUCAAUAUCC-AUGUC--UUCC 3' ||||||:| ||||||| |||| |||| target 3':UGGUCAGGACA------ACCGAGUCACCUCUUACAUCAAAGGU 5' |
-23.70 | 2 | RIC-seq |
| chrX:139866727:139866766:[+] | chr5:82834442:82834479:[+] | nonBSJ supported | CDS |
circRNA 5':CCCAGUCUUCCAUCAACUGGCUCAAUAUCC-AUGUC--UUCCA 3' ||||||:| ||||||| |||| ||||| target 3':UGGUCAGGACA------ACCGAGUCACCUCUUACAUCAAAGGUG 5' |
-25.50 | 6 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr5:82836555:82836590:[+] | target | - | chr5:82836565-82836566 | T>C | LAML-KR | ICGC |
| chrX:139866289:139866338:[+] | circRNA | - | chrX:139866318-139866319 | C>T | BTCA-JP | ICGC |
| chrX:139866566:139866605:[+] | circRNA | - | chrX:139866592-139866593 | C>A | LICA-CN | ICGC |
| chrX:139866567:139866605:[+] | circRNA | - | chrX:139866592-139866593 | C>A | LICA-CN | ICGC |