Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865598:139865616:[+] chr17:76869953:76869969:[-] nonBSJ supported 5UTR

circRNA 5':ACGUCUUCCAGGAAAUCCA 3'


            ||| ||||||: ||||


target  3':AGCA-AAGGUCUC--AGGUG 5'

 -14.80 1 RIC-seq
chrX:139865598:139865625:[+] chr17:76869953:76869974:[-] nonBSJ supported 5UTR

circRNA 5':ACGUCUUCCAGGAAAUCCAUGUCUUCCA 3'


            ||| ||||||: |||| |||||


target  3':AGCA-AAGGUCUC--AGGU---GAAGGA 5'

 -21.60 17 RIC-seq