Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866212:139866233:[+]	chr17:40674099:40674116:[+]	nonBSJ supported	3UTR	circRNA 5': UCCAGGAAAUCCGUGUCUUCCA 3' \|\|\|\|\|\|\| \|:\|\| :\|\|\| target 3':CGGGUCCUGUGGG-----GAGGA 5'	-18.20	1	RIC-seq
chrX:139866214:139866251:[+]	chr17:40674099:40674148:[+]	nonBSJ supported	3UTR	circRNA 5': CAGGAAAUCC---GUG-------UCUUCCA-GCA-AGUCCACGUCUUCCA 3' \|\|\| \|\|\|:\| \|\|\| :\|\|\|\|\| \|\| \|\| \|\|\| :\|:\|\|\| target 3':UGUCGUUUGGUAGUCACUGUGACUGGAAGGGACGGGUCCUGUG-GGGAGGA 5'	-27.90	2	RIC-seq
chrX:139866231:139866290:[+]	chr17:40674096:40674148:[+]	nonBSJ supported	3UTR	circRNA 5':CCAGCAAGUCCACGUCUUCCAACAAA-GCCAUGUCU-UCCA-GACUAUCCAUGUCUUCCAGAA 3' \|\|\|\|\|\|: \|\|\| \|\| \|\|\| :\|\| \| :\|\| :\|\|\| \|\|\| \|:\|\| :\|\|\| \|\| target 3':UGUCGUUU-GGU--AGUCAC-UGUGACUGGAAGGGACGGGUCCUG-UGGG-----GAGGACUC 5'	-32.50	15	RIC-seq