Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866274:139866307:[+] chr15:35189849:35189880:[-] nonBSJ supported CDS

circRNA 5':AUCCAUGUCUUCCAGAAAAUCCUUGUCUUCCCUC 3'


            ||||::||: || ||||| ||||||||


target  3':AAGGUGUAGGC-GUAGAA-AGGAAAAGAAGGGAA 5'

 -31.30 16 RIC-seq
chrX:139866275:139866307:[+] chr15:35189849:35189880:[-] nonBSJ supported CDS

circRNA 5': UCCAUGUCUUCCAGAAAAUCCUUGUCUUCCCUC 3'


            ||||::||: || ||||| ||||||||


target  3':AAGGUGUAGGC-GUAGAA-AGGAAAAGAAGGGAA 5'

 -31.30 1 RIC-seq