Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866205:139866243:[+] chr14:80117818:80117847:[+] nonBSJ supported Intron

circRNA 5':CGGGUCUUCCAGGAAAUCCGUGUCUUCCAGCAAGUCCAC 3'


            | :|||| | || :|||||||| ||||


target  3':ACGUAGAAAUA-CA--AGAUACAGAAGG------AGGUA 5'

 -21.00 2 RIC-seq
chrX:139866679:139866695:[+] chr14:80304911:80304933:[+] nonBSJ supported Intron

circRNA 5': UUCCAGCA-----UCUCUGUGU 3'


            |||||:|| ||||||||


target  3':AGAGGUUGUGAUAAAGAGACACC 5'

 -21.20 2 RIC-seq