5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865458:139865499:[+] | chr4:71672684:71672734:[+] | nonBSJ supported | 3UTR |
circRNA 5':CUUCCAGACAAUCCAUGUCUUCC-GGA----CAAUCC-AU---GUCUUCCA 3' |||| |:||| || ||| | ||| || :||: || target 3':AAAGGAAAAAUAAGAAUAGACGGACCUAAGAGAGAGGAUAAUUUAGGUGGG 5' |
-18.30 | 1 | RIC-seq |
| chrX:139865761:139865816:[+] | chr4:71587864:71587895:[+] | nonBSJ supported | 5UTR |
circRNA 5':CAGUGUCUUCCAGAAAGAAAUCCAGGUCUUCCAGUCAAUCAGUGUCUUCCAGAAAG 3' |||| |:|||||| ||:||| ||| |||||| target 3':UUCAC----------UUUUUAGG---AGGAGGAAA------CAC-----GUCUUUU 5' |
-18.10 | 4 | RIC-seq |
| chrX:139865535:139865554:[+] | chr4:71629302:71629333:[+] | nonBSJ supported | CDS |
circRNA 5': AGCAAAU---CCAGU--------CUUCCAGC 3' ||| ||||| |::|||| target 3':UUCGAAAAGAUGGUCAAGAUCUCCGGGGGUCU 5' |
-13.80 | 2 | RIC-seq |
| chrX:139865684:139865701:[+] | chr4:71658437:71658452:[+] | nonBSJ supported | Intron |
circRNA 5':AAAUCUGUGUCUUCCACC 3' ||||| :|||| ||| target 3':CUUAGA--UAGAAUGUGA 5' |
-9.70 | 2 | RIC-seq |