Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865830:139865843:[+]	chr6:111982040:111982054:[-]	nonBSJ supported	3UTR	circRNA 5':CCAGUCAGUCAGUG 3' \|\|: \|\|\| \|\|\| target 3':UGUUCUUCAAACACA 5'	-4.10	1	RIC-seq
chrX:139865831:139865871:[+]	chr6:112101780:112101820:[-]	nonBSJ supported	5UTR	circRNA 5': CAGUCAGUCAGUGUCUUCCAGAAAAAUCUAC--GUCUUCCACC 3' \|\|: \| :\|\|\| \|\|\| \|:\|\| \|\|\|\|\|\| \|\| target 3':GGUU-GCUAGUGUUUGAAAUAUAUGU--GGUGUACAGAAGAUGU 5'	-14.70	2	RIC-seq
chrX:139865817:139865840:[+]	chr6:112015618:112015650:[-]	nonBSJ supported	CDS	circRNA 5':AAAUCC-AGGUCUUCCAGUC---------AGUCA 3' \|\|\|\|\| \|:\|\|\| \|\|:\|\| \|\|\|\| target 3':GUUAGGCUUCAGUC-GUUAGAACGUAUACUCAGG 5'	-16.80	2	RIC-seq
chrX:139865865:139865885:[+]	chr6:112017644:112017662:[-]	nonBSJ supported	CDS	circRNA 5': UUCCACCAAAUCCAGGU-CUUC 3' \|\|\|\|\| \|\|\|\|\|\|\| \|:\| target 3':AAAGGUA----AGGUCCAUGGAU 5'	-15.80	2	RIC-seq
chrX:139866471:139866534:[+]	chr6:111982945:111983009:[-]	nonBSJ supported	CDS	circRNA 5':AAGGUAUGUCUUCCAACAAAGGUACGU---CUUCCA-GAAAAUCCAC-GUCUUCCAACCAAGCCAUGUC 3' \|\|\|\| \|\| \|\|\| \|\|\|\|\| \|\|: \| \|\|\|\|\|\|\|\| \|\|\|\| \|\|: target 3':GUCCAAA-AGU-GGUCCAA-CCAUGACCCCGAGACAGCGCCAUUUCAUCAGAAGGUCC-UUCGAGACGU 5'	-28.50	1	RIC-seq