Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866353:139866385:[+] chr6:112105503:112105548:[-] nonBSJ supported Intron

circRNA 5':UCUUCCAGCAAAUCCACGUCU-------------UCCAACAAAGCC 3'


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target  3':UGGACGUCGACCUUUUGUAGGACUGAUUAGUCAGAGGUUGUUUCGU 5'

 -26.70 2 RIC-seq
chrX:139866360:139866385:[+] chr6:112105525:112105548:[-] nonBSJ supported Intron

circRNA 5': GCAAAUCCACGUCUUCCAACAAAGCC 3'


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target  3':CUGAUUAGU--CAG-AGGUUGUUUCGU 5'

 -22.90 2 RIC-seq