Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866295:139866306:[+] chr7:87021732:87021745:[+] nonBSJ supported Intron

circRNA 5': CU-UGUCUUCCCU 3'


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target  3':GGAUAUAGAAAGGU 5'

 -7.50 2 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr7:87021732:87021745:[+] target - chr7:87021745-87021746 G>C PACA-CA ICGC