Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865966:139865981:[+] chr7:91924449:91924464:[+] nonBSJ supported CDS

circRNA 5':AUCCAUGUCUUCCAGA 3'


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target  3':AAGGUACAGAUCGUCG 5'

 -18.40 2 RIC-seq
chrX:139866127:139866175:[+] chr7:92015911:92015959:[+] nonBSJ supported CDS

circRNA 5':GGCCUCCA-GGUC--UUCCAGACUAUCCAUGUCUUCCAGAAAAUCCUUGUCU 3'


            ||||||| :||| |||| ||:|||| || ||


target  3': UGGAGGUGUCAGUAAAGGAACCUAACG---AGGAGGUGCACAACUUACUGAA 5'

 -28.10 1 RIC-seq
chrX:139866131:139866175:[+] chr7:92015911:92015957:[+] nonBSJ supported CDS

circRNA 5': UCCA-GGUC--UUCCAGACUAUCCAUGUCUUCCAGAAAAUCCUUGUCU 3'


            |||| :||| |||| ||:|||| || ||


target  3':GAGGUGUCAGUAAAGGAACCUAACG---AGGAGGUGCACAACUUACUGAA 5'

 -20.60 1 RIC-seq
chrX:139865596:139865614:[+] chr7:91898144:91898160:[+] nonBSJ supported Intron

circRNA 5':CCACGUCUUCCAGGAAAUC 3'


            || |:| |||||||


target  3':CGUUCGGCUU-UCCUUUA 5'

 -8.40 2 RIC-seq