5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865763:139865813:[+] | chrX:153593214:153593275:[-] | nonBSJ supported | CDS |
circRNA 5': GUGUCUUCCAGAAAGAAAU--------CCAG-------GUCUUCCAGUCAAUCAGUGUCUUCCAGA 3' |: ||: ||| |||| |||: |:|:|||||:| ||| |:| |||| target 3':UCGGAGGUGGUGUUUCAGACGACUGAACGGUUGCUGCGGCGGGAGGUCGG---GUCCCGG--GGUCC 5' |
-40.20 | 2 | KARR-seq |
| chrX:139865842:139865873:[+] | chrX:153593201:153593225:[-] | nonBSJ supported | CDS |
circRNA 5':UGUC-UUCCAGAAAAAUCUACGUCUUCCACCAA 3' ||| |:|| || || | |:||||||| target 3':GCAGCAGGGGCU------AU-C-GGAGGUGGUG 5' |
-20.50 | 2 | KARR-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chrX:153593214:153593275:[-] | target | 1429750 | chrX:153593258-153593259 | C>A | Melnick-Needles_syndrome|Heterotopia,_periventricular,_X-linked_dominant|Oto-palato-digital_syndrome,_type_II|Frontometaphyseal_dysplasia | ClinVar |
| chrX:153593214:153593275:[-] | target | - | chrX:153593253-153593254 | G>A | EOPC-DE | ICGC |