Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865967:139866035:[+] chrX:148609544:148609593:[-] nonBSJ supported Exon

circRNA 5':UCCAUGUCUUCCAGAAAAUCCAUGUCUUC-CAGUAACCUCCCAGUCUUCCAGAAAAUCCACGUCUUCCCA 3'


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target  3': GG-ACAGU---UCUUACUCGUACAGAAUCGUCACUCCGUAA--------------AGGUGUAGAAGAG 5'

 -32.40 3 KARR-seq
chrX:139866008:139866035:[+] chrX:148609561:148609593:[-] nonBSJ supported Exon

circRNA 5':AGUCUUC-CAGAAAA-----UCCACGUCUUCCCA 3'


            ||||| ||| |||||:||||| |


target  3':ACAGAAUCGUCACUCCGUAAAGGUGUAGAAGAG 5'

 -21.70 1 KARR-seq