Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866209:139866224:[+] chrX:135309453:135309468:[-] nonBSJ supported CDS

circRNA 5':UCUUCCAGGAAAUCCG 3'


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target  3':CGAAGGACCAGAAGGA 5'

 -11.90 1 KARR-seq
chrX:139866335:139866350:[+] chrX:135309453:135309468:[-] nonBSJ supported CDS

circRNA 5':UCUUCCAGGAAAUCCG 3'


            ||||| || |||


target  3':CGAAGGACCAGAAGGA 5'

 -11.90 1 KARR-seq