5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865527:139865574:[+] | chrX:134692137:134692171:[+] | nonBSJ supported | Intron |
circRNA 5':AGU-CUUCCAGCAAAUCCAGUCUUCCAGCAAUUACUGGUCUUCCACCAA 3' || |||| ||| || ||||| ||||||| ||||| target 3':CCAUGAAGA-----UAGA-CAAAAGGU-----AUGACCAAU--GUGGU 5' |
-21.80 | 1 | KARR-seq |
| chrX:139865561:139865569:[+] | chrX:134692163:134692172:[+] | nonBSJ supported | Intron |
circRNA 5':UGGU-CUUCC 3' ||| |||| target 3':UCCAUGAAGA 5' |
-7.60 | 1 | KARR-seq |
| chrX:139865413:139865446:[+] | chrX:134697890:134697921:[+] | nonBSJ supported | Intron |
circRNA 5':UCUCAAGGUCUUCCAGAUAAUC-CUGA--GCUU-CCAG 3' |||||||| :||||| |||| :|: ||| target 3':UGAGUUCCA------UUAUUACCGACUUUUGGCCGGUU 5' |
-19.30 | 1 | KARR-seq |