Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866016:139866036:[+] chrX:76794030:76794049:[-] nonBSJ supported Intron

circRNA 5':AGAAAAUCCACGUCUUC-CCAA 3'


            |||||:||| | |||| |||


target  3': UUUUUGGGU-CUGAAGUGGUG 5'

 -17.50 3 KARR-seq
chrX:139866016:139866049:[+] chrX:76794030:76794063:[-] nonBSJ supported Intron

circRNA 5':AGAAAAUCCACGUCUUC-CCAACAAUCCAA---GUCUU 3'


            |||||:||| | |||| ||| ||| :|||


target  3': UUUUUGGGU-CUGAAGUGGUGACAC-GUUAUAUAGA 5'

 -18.40 3 KARR-seq