5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866505:139866558:[+] | chrX:27406046:27406093:[-] | nonBSJ supported | Intron |
circRNA 5':AAAAUCCACGUCUUCCAACCAAGCCAUGUCUUCCAGAAAAUCCACGUCUUCCAG 3' |||||| ||| :|| |||| |||| |: ||| target 3':AUUUAGGA-CAGUUCUCACUAGUUU--UAGUU--UCUUAU-GGUGGUGGUGGUG 5' |
-19.20 | 1 | KARR-seq |
| chrX:139866490:139866532:[+] | chrX:27406059:27406096:[-] | nonBSJ supported | Intron |
circRNA 5':AGGUACGUCUUC--CAGAAAAU-CCACGUCUUCCAACCAAGCCAUG 3' ||| :|| ||:| ||| |||| || ||| :|||: target 3':CUCAC-UAGUUUUAGUUUCUUAUGGUGGU---GG-UGG--UGGUG 5' |
-18.90 | 1 | KARR-seq |