Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866220:139866276:[+]	chrX:14888001:14888052:[-]	nonBSJ supported	Intron	circRNA 5':AUC-CGUGU-CUUCCAGCAAGUCCACGUCUUCCAACAAAGCCAUGUCUUCCA--GACUAUC 3' \|\| \|:\|\| \|\|\| \|:\| :\|\|\| \|\|\|\| \|\|\| \|\| \|\|\|\|\|\| target 3':AAGAGUACUUGAAU-UUGAC------UAGAUUUUUGUAUU--UACUGAUAAAUACUGAUAA 5'	-12.50	3	KARR-seq
chrX:139866232:139866284:[+]	chrX:14887990:14888050:[-]	nonBSJ supported	Intron	circRNA 5':CAGCAAGUCCACGUCUUCC-AACA-AAGCCAUGUCUUCCA--------GACUAUCCAUGUCUU 3' \|\|\|\|\|: \| \|\|\|: \|\|\| \|\|:\| :\|\|\| \|\|\|\|\|\| \|\|\| \|\| target 3':UUCGUUU-GAAUAAGAGUACUUGAAUUUGAC-UAGAUUUUUGUAUUUACUGAUAAAUACUGAU 5'	-16.70	3	KARR-seq