Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865727:139865735:[+]	chr9:136198792:136198800:[-]	nonBSJ supported	CDS	circRNA 5':GUUCUUCCA 3' \|\|\|\|\|\|\| target 3':GAAGAAGGA 5'	-9.70	1	KARR-seq
chrX:139865727:139865788:[+]	chr9:136198792:136198855:[-]	nonBSJ supported	CDS	circRNA 5':GUUCUUCCA--GAAAAAUCUAGAUCUUCCAGUCAAUCA------GUGUCU--UCCAGAAAGAAAUCCAGGUC 3' \|\|\|\|\|\|\| \| \|\|\| \|: \|\| \|\|\| \|::\|\|\| \|\|\|\| \|\|\| \|:\| target 3':GAAGAAGGACGCGUCCAAGACGGCGGCGGCCAGGACCGCGACGACGUAGAAGAGGU---------GGUGCGGC 5'	-26.00	1	KARR-seq