Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866292:139866308:[+] chr9:130301944:130301988:[-] nonBSJ supported Intron

circRNA 5':AUCCUUGUCU----------------------------UCCCUCA 3'


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target  3':CGGGACCGGGGUCCUUGACUGGCCCUACGACCGGAGUCGGGGAGG 5'

 -14.80 1 KARR-seq
chrX:139866293:139866308:[+] chr9:130301945:130301988:[-] nonBSJ supported Intron

circRNA 5':UCCUUGUCU----------------------------UCCCUCA 3'


            ||| |:|: :|||||


target  3':GGGACCGGGGUCCUUGACUGGCCCUACGACCGGAGUCGGGGAGG 5'

 -14.70 1 KARR-seq