5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865733:139865739:[+] | chr9:91090516:91090522:[+] | nonBSJ supported | 3UTR |
circRNA 5':CCAGAAA 3' ||||| target 3':CGUCUUA 5' |
-4.40 | 1 | KARR-seq |
| chrX:139865713:139865765:[+] | chr9:91065847:91065901:[+] | nonBSJ supported | Intron |
circRNA 5': UUCCAGUAAAUCUAGUUCUUCCAGAAAAA-UCUAGAU--CUUCCAG---UCA--AUCAGUG 3' ||||| :|| :|| ||| || ||:| ||||| ||| |:|||: target 3':GAAGGU-------GUCCGGAUUGUCGGUUCGAGGUAGUCCGAAGGAUUGAAGUUUUGGUCGU 5' |
-24.40 | 1 | KARR-seq |
| chrX:139865530:139865560:[+] | chr9:91073028:91073075:[+] | nonBSJ supported | Intron |
circRNA 5': CUUCCA--GCAAA--------------UCCAGUCUUCCAGCAAUUAC 3' |||| ||||| || |||||||||:|||||| target 3':CGAAGAUUGCGUUUACUACAUUGAACGAAGAUCAGAAGGUUGUUAAUA 5' |
-28.70 | 3 | KARR-seq |