Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865503:139865520:[+]	chr9:80339355:80339375:[-]	nonBSJ supported	Intron	circRNA 5':AGCUC-CAA--GUCUUCCAGU 3' \|\|:\| \| \|:\|\|:\|\|\|: target 3':GCGGGUGGAACCGGAGGGUUU 5'	-16.40	2	KARR-seq
chrX:139865475:139865522:[+]	chr9:80339343:80339413:[-]	nonBSJ supported	Intron	circRNA 5':UCUUCC--GGA-CAAUCCAU----GUCUUCCAAGAAGCU-----------------CCAAGUCUUCCAGUAA 3' \|:\|\| \|\|\| \| :\|\|\|: \|:\|\|:\|\|\|\|: \|\|\| \|\|\| \| :\|\|\|\|:\| target 3': GGAGUUCCCUAGGCGGGUGGAACCGGAGGGUUUCACGACUCUAAUGUCCGCACUCGGUGGUGUGGGUCGUC 5'	-34.80	2	KARR-seq