Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865717:139865771:[+]	chr9:35057079:35057144:[-]	nonBSJ supported	3UTR	circRNA 5':AGUAAAUCUAGUUCUU----------CCAGAAAAAUCUAGAUCUUCCA-GUCA--AUCAGUGUCUUCC 3' \|:\| \|:\|\|:\|\| \|\|\| \|: \|\|\| :\| \|\| \|\|\|\| \|\|\|\| \|\|\|\|\|\|\| target 3':CCGUCC-GGUCGAGUGACGUGCGACCGGUGGUGGUGAAUC-GGUAUGUCCAGUAGUAGUAACAGAAGA 5'	-27.80	3	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr9:35057079:35057144:[-]	target	-	chr9:35057084-35057085	G>T	LICA-CN	ICGC