5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866012:139866070:[+] | chr7:156944866:156944935:[+] | nonBSJ supported | Intron |
circRNA 5': UUCCAGAAAA-UCC------ACG-UCUUCCCAA--CAAUCCAAGUCUUCCGGAUAAUUUGGGUCUUC-CU 3' |:|||| ||| || ||:||||| | ||| | || || |:: :|:|||| || target 3':GGGGGUCGAGAGAGGGACUGAUGGAAGGAGGGUCGAGACAGGGACUGAUGGAAGG--AGGGUCGGAAGAGAA 5' |
-39.70 | 1 | KARR-seq |
| chrX:139866614:139866638:[+] | chr7:157036135:157036174:[+] | nonBSJ supported | Intron |
circRNA 5':AUCUCCAG--GUCUUCC-----------AGCAUC-UCCA 3' || ||| |||| || |||| :||| target 3':AAGUCGUCUACAGAUGGUGCCUAUUGACUCGUCUCGGGUG 5' |
-13.20 | 1 | KARR-seq |
| chrX:139865973:139866027:[+] | chr7:156944861:156944909:[+] | nonBSJ supported | Intron |
circRNA 5':UCUUCCAGAAAA-UCCAUGUCUUCCAGUAACCUCCCAGUCUUCCAGAAAAUCCACG 3' ||:|||| ||| || || || ||||||||:|||| ||||| target 3':GGAGGGUCGAGACAGGGACUGAUGGAA---GGAGGGUCGGAAGAGA----AGGUGA 5' |
-48.20 | 1 | KARR-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr7:156944866:156944935:[+] | target | - | chr7:156944935-156944936 | G>A | LAML-KR | ICGC |