Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865503:139865520:[+] chr7:91637113:91637130:[+] nonBSJ supported Intron

circRNA 5':AGCUCCAAGUCUUCCAGU 3'


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target  3':ACGUAAAGAAGAAGGUCU 5'

 -14.80 1 KARR-seq
chrX:139866152:139866163:[+] chr7:91726527:91726537:[+] nonBSJ supported CDS

circRNA 5':AUGUCUUCCAGA 3'


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target  3': AGAGAAGGUCG 5'

 -13.00 3 KARR-seq
chrX:139866278:139866289:[+] chr7:91726527:91726537:[+] nonBSJ supported CDS

circRNA 5':AUGUCUUCCAGA 3'


            | ||||||||


target  3': AGAGAAGGUCG 5'

 -13.00 3 KARR-seq
chrX:139865481:139865520:[+] chr7:91637113:91637142:[+] nonBSJ supported Intron

circRNA 5':GGACAAUCCAUGUCUUCCAAGAAGCUCCAAGUCUUCCAGU 3'


            ||| ||| || ||||||||


target  3':ACUGACAAGAACA----------CGUAAAGAAGAAGGUCU 5'

 -14.80 1 KARR-seq