Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865862:139865889:[+] chr7:44917656:44917681:[-] nonBSJ supported 3UTR

circRNA 5':GUCUUCC-ACCAAAUCCAGGUCUUCCAGU 3'


            |||||| |||| || |:|||| ||:


target  3':AAGAAGGUUGGUC--GGACUAGAACGUU 5'

 -22.50 2 KARR-seq
chrX:139866676:139866705:[+] chr7:44917656:44917681:[-] nonBSJ supported 3UTR

circRNA 5':GUCUUCCAGCAUCUCUGUGUCUUCCAGCAU 3'


            |||||||:| :||| :|||| |||


target  3':AAGAAGGUUGGUCGGAC-UAGAA---CGUU 5'

 -22.90 2 KARR-seq