Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866683:139866710:[+] chr7:23038688:23038716:[-] nonBSJ supported Intron

circRNA 5':AGCAUCUCUGUGU-CUUC--CAGCAUCUUCA 3'


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target  3':ACGU--AGACACUUGGUUUUGUCGUAGUAGA 5'

 -23.60 1 KARR-seq
chrX:139866683:139866704:[+] chr7:23038688:23038711:[-] nonBSJ supported Intron

circRNA 5':AGCAUCUCUGUGU-CUUC--CAGCA 3'


            ||| |||||| |: |||||


target  3':ACGU--AGACACUUGGUUUUGUCGUA 5'

 -16.80 1 KARR-seq