Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866476:139866540:[+]	chr7:16520848:16520895:[-]	nonBSJ supported	Intron	circRNA 5':AUGUCUUCCAACAAAGGUACGUCUUCCAGAAAAUCCACGUCUUCCAACCAAGCCAUGUCUUCCAG 3' \|:\|\|\|\| \|\|\| \|\|\| \|: \|\|\|\|\| \|\|\|\|\| \| :\|\| \|\| \|\|\|\|\|\| target 3':AAUAGAAAAUUGA--CCA-GUUAAA---CUUUU-------GAAGGA--GAAUGG-AC-GAAGGUG 5'	-25.20	2	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr7:16520848:16520895:[-]	target	-	chr7:16520855-16520856	T>G	PACA-CA	ICGC
chr7:16520848:16520895:[-]	target	-	chr7:16520887-16520888	T>C	LAML-KR	ICGC