Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865692:139865721:[+]	chr6:127797186:127797220:[-]	nonBSJ supported	CDS	circRNA 5':GUCUUCCAC--CAAAUCCAA---GUCUUCCAGUAA 3' \|\|:\|\|\| \| \|\| \|\|\| \|\|\|\|\|\|\|\| :\| target 3':AAGGAGGCGUCGUCGAGGCAGAGCAGAAGGUGGUC 5'	-25.70	2	KARR-seq
chrX:139865655:139865717:[+]	chr6:127797190:127797235:[-]	nonBSJ supported	CDS	circRNA 5':AUCUUCCAGCUAAUCCAUGUCUUCCAGAAAAAUCUGUGUCUUCCACCAAAUCCAAGU-CUUCCA 3' \|\|: \|\|\|\| \|\|\| \|\|\|\|: \|\|\|\|\|\|\|\|\|\|\| \| \|\| \|\| \|\| \|\| target 3': AGGC-GUCGUCGAGG--CAGAG--------------CAGAAGGUGGUCGACGUCCACGACGGC 5'	-37.70	2	KARR-seq