Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866499:139866561:[+]	chr6:119386176:119386229:[-]	nonBSJ supported	Intron	circRNA 5':UUC-CAGAAAAUCCACGUCUUCCAACCAAGCCAUGUCUUC-CAGAAAAUCCACGUCUUCCAGAAA 3' \|\| \|\|\|\| \|\| \|\|\|:\|\|\| \|\|\| \|\| \|\|\|\| \| \|:\|\|:\|\|\|\|:\|\| target 3': AGAGUCU------UG-AGAGGGUA-GUUAAA-AC-GAAGAGAACCCCAUUGGUAGGAGGUUUUA 5'	-31.90	2	KARR-seq
chrX:139866517:139866561:[+]	chr6:119386186:119386229:[-]	nonBSJ supported	Intron	circRNA 5': UUCCAACCAAGCCAUGUCUUC-CAGAAAAUCCACGUCUUCCAGAAA 3' \|:\|\|\| \|\|\| \|\| \|\|\|\| \| \|:\|\|:\|\|\|\|:\|\| target 3':GAGGGUA-GUUAAA-AC-GAAGAGAACCCCAUUGGUAGGAGGUUUUA 5'	-24.40	1	KARR-seq
chrX:139866519:139866561:[+]	chr6:119386188:119386229:[-]	nonBSJ supported	Intron	circRNA 5': CCAACCAAGCCAUGUCUUC-CAGAAAAUCCACGUCUUCCAGAAA 3' \|\|\| \|\|\| \|\| \|\|\|\| \| \|:\|\|:\|\|\|\|:\|\| target 3':GGGUA-GUUAAA-AC-GAAGAGAACCCCAUUGGUAGGAGGUUUUA 5'	-22.60	1	KARR-seq