Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865868:139865915:[+]	chr6:111345422:111345468:[+]	nonBSJ supported	CDS	circRNA 5': CACCAAAUCCAGGUCUUCCAGUCAAUCCACAUCUUCCGGAAAAAAUCC 3' \| \|\| \|\|\|\|:\|\|: :\|\|\| \|\|\|\|\|\|:: \|\|\|\| target 3':AGGAGUCUUGGUCUAGGUUACUCCCAGGGUAGAGAAGGUUAAG-UUAG 5'	-29.70	3	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139865868:139865915:[+]	circRNA	-	chrX:139865903-139865904	C>T	LINC-JP	ICGC