5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865840:139865872:[+] | chr6:34256674:34256710:[-] | nonBSJ supported | CDS |
circRNA 5':AGUGUCUUCCAGAA-AAAUCUA--CGUCUUCCA-CCA 3' |:|||||| |||:| | |||||| || target 3':CCGCAGAAGAUAAAAUUUGGUAAGGGAGAAGGAAGGA 5' |
-24.80 | 1 | KARR-seq |
| chrX:139865660:139865683:[+] | chr6:34393157:34393175:[-] | nonBSJ supported | Intron |
circRNA 5':CCAGCUAAUCCAUGUCUUCCAGAA 3' ||| :||| |::|||:| target 3':AGUCAG--GGGU---GGGGGUUUG 5' |
-13.60 | 1 | KARR-seq |
| chrX:139865830:139865872:[+] | chr6:34256661:34256710:[-] | nonBSJ supported | CDS |
circRNA 5':CCAGUCAGUCA---GUGUCUUCCAGAA-AAAUCUA--CGUCUUCCA-CCA 3' |||: |:|||||| |||:| | |||||| || target 3':CGUCGUGAAAAUACCGCAGAAGAUAAAAUUUGGUAAGGGAGAAGGAAGGA 5' |
-25.80 | 1 | KARR-seq |