Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865896:139865927:[+]	chr6:7904885:7904917:[-]	nonBSJ supported	5UTR	circRNA 5':ACAUCUUCCGGAAAAAAUCCAG-GUCUUCCAGC 3' \|\|\|\|\|\|\|\|: \|\|\|\|:\|\|\|\| target 3':CGUAGAAGGUACGACAACAUAAACAGAGGGUCC 5'	-27.40	2	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr6:7904885:7904917:[-]	target	-	chr6:7904895-7904896	T>C	LINC-JP	ICGC
chrX:139865896:139865927:[+]	circRNA	-	chrX:139865903-139865904	C>T	LINC-JP	ICGC