Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865457:139865519:[+] chr6:2767445:2767506:[+] nonBSJ supported Intron

circRNA 5':UCUUCC-AGACAAUCCAUGUCUUCCGGACAAUCCAUGUCUUCCAAGAAGCUC-CAAGUC---UUCCAG 3'


            |||| || | || ||| ||| || ||: ||:|||| || ||||| |||||


target  3':UGAAGAAUC-GAAAGAGACAAAAGACCGA----GUGGAGGAGGUAAAAAAAGAGUUCACAAAAAGGU 5'

 -31.00 1 KARR-seq
chrX:139865458:139865519:[+] chr6:2767445:2767506:[+] nonBSJ supported Intron

circRNA 5': CUUCC-AGACAAUCCAUGUCUUCCGGACAAUCCAUGUCUUCCAAGAAGCUC-CAAGUC---UUCCAG 3'


            |||| || | || ||| ||| || ||: ||:|||| || ||||| |||||


target  3':UGAAGAAUC-GAAAGAGACAAAAGACCGA----GUGGAGGAGGUAAAAAAAGAGUUCACAAAAAGGU 5'

 -30.90 1 KARR-seq