Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866745:139866779:[+] chr5:176900447:176900475:[-] nonBSJ supported CDS

circRNA 5':GGCUCAAUAUCCAUGUCUUCCAACGUCUCCA-GUGU 3'


            |||| ||| |||: |::|||| ||:


target  3':GCGAG----AGG---AGAGCCUAGUGGAGGAGCAUU 5'

 -17.70 2 KARR-seq