Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865894:139865931:[+]	chr5:137677299:137677337:[+]	nonBSJ supported	Intron	circRNA 5': CCACAUCUUCCGGAAA---AAAUCCAGGUCUUCCAGCCAAU 3' \|\|\|\|\|\|\|\|\|\|\|:: \|\|\|:\|\| \|\| \|\|\|\| \|\|\|\| target 3':AGGUGUAGAAGGUUGUAGAGUUUGGGA--AG-AGGUGGGUUC 5'	-38.50	2	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139865894:139865931:[+]	circRNA	-	chrX:139865903-139865904	C>T	LINC-JP	ICGC