5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866204:139866255:[+] | chr5:41739533:41739591:[-] | nonBSJ supported | CDS |
circRNA 5':CCGGGUCUUCCAGGA----AAUCCGUGUCUUCCAG-----CAAGUCCACGUCUUCCAACAA 3' |:||:||||| :|| |||| | ||| || | ||||||:|| ||| target 3':AGUCCGGAAGGGUCUCGAGUUAGUCUCAGUUGGGAAAGAAGAACAGGUGUAGUUUG-UGU 5' |
-43.00 | 2 | KARR-seq |
| chrX:139865793:139865853:[+] | chr5:41805723:41805774:[-] | nonBSJ supported | CDS |
circRNA 5':AGUCAA--UCAGUGUCUUCCAGAAAGAAA-UCCAGGUCUUCCAGUCAGUCAGUGUC-UUCCAGAA 3' |||| :||| || | |||| ||| :|||:|| || |||| || target 3':GCAGUAGAGGUC-CAAAUCGUCUAAACCGAAGGGGUAGAGGG------------AGAAAGGCCUA 5' |
-27.20 | 1 | KARR-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr5:41739533:41739591:[-] | target | 3062096 | chr5:41739555-41739556 | CAG>C | Succinyl-CoA_acetoacetate_transferase_deficiency | ClinVar |
| chr5:41805723:41805774:[-] | target | 2115740 | chr5:41805750-41805751 | C>CT | Succinyl-CoA_acetoacetate_transferase_deficiency|OXCT1-related_disorder | ClinVar |
| chr5:41739533:41739591:[-] | target | - | chr5:41739578-41739579 | C>G | LICA-CN | ICGC |