5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866737:139866788:[+] | chr5:34823877:34823931:[+] | nonBSJ supported | CDS |
circRNA 5':CAUCAACUGGCUCAAUAUCCAUGUCUUCCAACGUCUC---CAGUGUGCUGAUCUU 3' ||| |::||||| |||| ||: || |||: :||| |:|| target 3':UUAGGAGGUCGAGUCGGACCCGAAGAAACAUGUCGACACUGUCGAGCGAGUGGAC 5' |
-29.20 | 2 | KARR-seq |
| chrX:139866734:139866765:[+] | chr5:34823828:34823857:[+] | nonBSJ supported | CDS |
circRNA 5':UUCCA--UCAACUGGCUCAAUAUCCAUGUCUUCC 3' ||| ||| ||||| ||||||:|| target 3':UAGGAUAAGU--ACCGAAGAAA--GUACAGGAGU 5' |
-21.70 | 1 | KARR-seq |
| chrX:139866734:139866772:[+] | chr5:34823820:34823857:[+] | nonBSJ supported | CDS |
circRNA 5':UUCCA--UCAACUGGCUCAAUAUCCAUGUCUUCCAA--CGUCU 3' ||| ||| ||||| ||||||:|| |:|| target 3':UAGGAUAAGU--ACCGAAGAAA--GUACAGGAGUCGAAGUAG 5' |
-23.80 | 1 | KARR-seq |