Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866777:139866826:[+]	chr5:24581637:24581693:[-]	nonBSJ supported	Intron	circRNA 5':UGUGCUGAUCUUC-UGACAUUCAGG-------UCUUCCAGUGUC-UGCAAUAUCCAGGU 3' \|\|\|\| \|\|\|\| \|\|\| \|\|\|\| :\|\|\|\|\|\| \|\|: \|\| \|\|\|:\|\| target 3':UUACGUUC-GAAGCACUCCU-GUCCUACCAACGGAAGGU-ACGUCACUACACUGGUUCAC 5'	-29.10	4	KARR-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866777:139866826:[+]	circRNA	-	chrX:139866793-139866794	C>T	LICA-CN	ICGC