5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865502:139865552:[+] | chr5:1328715:1328754:[-] | nonBSJ supported | Intron |
circRNA 5':AAGCUCCAAGUCUUC--CAGUAAAUCAAGUCUUCCAGCAAAUCCAGUCUUCCA 3' |||||| ||:|| ||| || || |||||| ||:||| target 3':GUCGAGG---AGGAGAUGUCUGU--GUGAAGUAGGUCG--------AGGAGGA 5' |
-35.10 | 4 | KARR-seq |
| chrX:139866283:139866320:[+] | chr5:1328769:1328808:[-] | nonBSJ supported | Intron |
circRNA 5': UUCCAGAAAAUCCUUGUCUUCCCUCAAA--UCCA-UAGCUU 3' |||||| ||||||||| || || :||||: target 3':GAAGGUCG---AGGAACAGAUGUCUGUGUAAAGUAGGUCGAGG 5' |
-26.30 | 4 | KARR-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chrX:139866283:139866320:[+] | circRNA | - | chrX:139866318-139866319 | C>T | BTCA-JP | ICGC |