5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866379:139866440:[+] | chr3:176782879:176782919:[-] | nonBSJ supported | Intron |
circRNA 5':CAAAGCCAUGUCUUCCAUCAAAUUAAUGUCUUCCAGCCUACUUGUGUCUUCCAACAAAGGUA 3' |||:|||| |||| :||| ||| ||||| target 3':UUUUUGGUAAACUAAAAUAAU---UUAC---------------UACAUU---UUGCUUCCAA 5' |
-11.70 | 3 | KARR-seq |
| chrX:139866369:139866396:[+] | chr3:176782926:176782959:[-] | nonBSJ supported | Intron |
circRNA 5':CGUCU----------UCCAACAAAGCCAUGUCUUCCAU 3' |:|| :| |||||| || |||||| target 3':ACGGAUUAUUAUUUUGGACUGUUUCA--AC-GAAGGU 5' |
-15.40 | 3 | KARR-seq |
| chrX:139866374:139866396:[+] | chr3:176782940:176782959:[-] | nonBSJ supported | Intron |
circRNA 5':UCCA-ACAAAGCCAUGUCUUCCAU 3' || |||||| || |||||| target 3':UGGACUGUUUCA--AC-GAAGGU 5' |
-14.70 | 1 | KARR-seq |
| chrX:139866532:139866583:[+] | chr3:176802442:176802489:[-] | nonBSJ supported | Intron |
circRNA 5':GUCUUCCAGAAAAUCCACGUCUUCCAGAAAAUAUAUGUCUUCCA--ACUAAGCU 3' |||||| ||:||| || ::||| ||| || target 3':AAGAAGGACCUAA------AGGAGGAAAGGACACGACCUGGGGUAAUGAGACGU 5' |
-20.50 | 1 | KARR-seq |