Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865698:139865719:[+] chr3:150168841:150168862:[+] nonBSJ supported Intron

circRNA 5': CACCAAAUCCAAGUCUU--CCAGU 3'


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target  3':UGUGG---GGGAACGGGUUUGGUUG 5'

 -13.20 3 KARR-seq
chrX:139865708:139865721:[+] chr3:150168750:150168783:[+] nonBSJ supported Intron

circRNA 5':AAGUCU-------------------UCCAGUAA 3'


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target  3':GUCAGGAUUCCUUAGUAUGUGACAAAGGUCAUUU 5'

 -12.70 1 KARR-seq