Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866093:139866139:[+] chr3:117383377:117383432:[-] nonBSJ supported Intron

circRNA 5':AGCCAUGUCUUCCAGAAAAUCC--ACA-UCU--UC-CAAUGGCCUCC----------AGGUCU 3'


            ||| ||||| |||| ||| ||| || || ||| || |||||


target  3':GUGG-ACAGAUAAG----UAGGAAUGUAAGAAAAGAGUCA-CGGUGGUGAGAUUAAAUCCAG 5'

 -26.80 2 KARR-seq