Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866194:139866241:[+]	chr3:107333927:107333991:[+]	nonBSJ supported	Intron	circRNA 5':UCCAAAAAAUCCGGGUCUUCCAGGAAA------------------UCCGUGUCUUCC--AGCAAGUCC 3' \|\|\|\| \|\| :\|\|\|\|:\| \|\| \|\|\| : \|\|:\|\| \|\|\|\| \|\|\| target 3':UGGUUAUAU-GG-UCAGAGGAUCGACUAAAGACAUCGAGAUGAACAGG-GGAGGAGUUUUCGUA-AGGA 5'	-26.00	2	KARR-seq
chrX:139866203:139866218:[+]	chr3:107334442:107334456:[+]	nonBSJ supported	Intron	circRNA 5':UCC-GGGUCUUCCAGGA 3' \|\| :\|\|:\| \|\|\|:\| target 3':UGGAUCCGG--GGUUCC 5'	-13.70	1	KARR-seq