Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865977:139866033:[+] chr3:93658308:93658358:[-] nonBSJ supported Intron

circRNA 5':CCAGAAAAUCCAUGUCUUCCAGUAACCUCCCAGUCUUCCAGAAAAUCCACGUCUUCC 3'


            ||| |||| |||||| ||||| ||:|| || :||||


target  3':AGUCCG--AGGUUAAGAAGGAGCC-GGAGGU---GAGGGGCUGUGAUAUUAGGAAGA 5'

 -35.90 2 KARR-seq